ahdb.csbb.ntu.edu.tw
AH-DB
http://ahdb.csbb.ntu.edu.tw/stat.html
Onclick="return gaq link('matilto:darby@mail.ncku.edu.tw? Ase) contains 562,424 apo-holo pairs of 3,369 proteins from 677 organisms. These pairs can be categorized into two groups. The first group considers the ligand and ion mapping, namely the joint complex. Must have all the ligands and ions of the corresponding core complex. If the joint complex. Has more ligands and ions than the corresponding core complex. The extra ligands and ions would be regarded as added molecules. A integrated protein disorde...
ahdb.csbb.ntu.edu.tw
AH-DB
http://ahdb.csbb.ntu.edu.tw/help.html
Onclick="return gaq link('matilto:darby@mail.ncku.edu.tw? Pesudo ligands in AH-DB. Superimposition algorithms in AH-DB. Conformational transitions are commonly observed in various protein interactions which carry out important biological functions. For example, adenylate kinase (AdK), which catalyzes the phosphoryl transfer from ATP to AMP, undergoes a large conformational variation from an open state (the apo structure) to a closed state (the holo structure). Entries to pair apo and holo structures.
nar.oxfordjournals.org
AH-DB: collecting protein structure pairs before and after binding
http://nar.oxfordjournals.org/content/40/D1/D472.full
View Current Issue (Volume 44 Issue 14 19 August 2016). AH-DB: collecting protein structure pairs before and after binding. Department of Electrical Engineering, National Cheng Kung University, Tainan 70101, Taiwan. To whom correspondence should be addressed. Tel: 886 6 2757575. Fax: 886 6 2345482. Email: darby{at}mail.ncku.edu.tw. August 16, 2011. October 10, 2011. October 12, 2011. This work presents the Apo Holo DataBase (AH-DB, http:/ ahdb.ee.ncku.edu.tw/. Proteinase inhibitors ( 7. Prion peptides ( 8.
ahdb.csbb.ntu.edu.tw
AH-DB » News
http://ahdb.csbb.ntu.edu.tw/news.html
Onclick="return gaq link('matilto:darby@mail.ncku.edu.tw? Ase) collects apo and holo structure pairs of proteins. AH-DB has been updated according to the Protein Data Bank ( PDB. Release of 27 March 2013. Now AH-DB contains 747036 apo-holo structure pairs of 3683 proteins from 715 organisms. In addition, the statistics page has been re-designed. To see this sample in action, please click the corresponding [Load Sample] button in the AH-DB homepage. We have made a video to introduce AH-DB. Of the figure b...
