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Bologna Annotation Resource 3.0

BAR 30 Bologna Annotation Resource. Protein functional and structural annotation. Accepted queries: Uniprot accession. Ligand code, NCBI taxonomy id. Data-validation-error-msg="Please specify only one FASTA sequence, complete with header, with a length in range 40-11000" class="form-control". Or upload a FASTA file. Sample sequence MTLSHSALQFWTHLYLWCLLLVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDV VIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIP DIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQN...

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Bologna Annotation Resource 3.0 | bar.biocomp.unibo.it Reviews

<META> DESCRIPTION

BAR 30 Bologna Annotation Resource. Protein functional and structural annotation. Accepted queries: Uniprot accession. Ligand code, NCBI taxonomy id. Data-validation-error-msg=Please specify only one FASTA sequence, complete with header, with a length in range 40-11000 class=form-control. Or upload a FASTA file. Sample sequence MTLSHSALQFWTHLYLWCLLLVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDV VIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIP DIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQN...

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1 protein function prediction

2 electronic annotation

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tutorial,statistics,references,bar hmg,sus bar,query,gene ontology term,pfam,pdb id,example queries,ligand mg,fasta sequence,warning,or european commission

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Bologna Annotation Resource 3.0 | bar.biocomp.unibo.it Reviews

https://bar.biocomp.unibo.it

BAR 30 Bologna Annotation Resource. Protein functional and structural annotation. Accepted queries: Uniprot accession. Ligand code, NCBI taxonomy id. Data-validation-error-msg="Please specify only one FASTA sequence, complete with header, with a length in range 40-11000" class="form-control". Or upload a FASTA file. Sample sequence MTLSHSALQFWTHLYLWCLLLVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDV VIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIP DIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQN...

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bar.biocomp.unibo.it

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BAR+

https://bar.biocomp.unibo.it/bar2.0/index.html

BAR Bologna Annotation Resource. Protein clusters for sequence annotation. Is a server for the annotation of protein sequences relying on a comparative large-scale genome analysis across 988 species and the entire UniProt. With BAR and a sequence/set of sequences (maximum number per run=50) you can annotate when possible: function. Gene Ontology), structure. Protein Data Bank), structural classification. SCOP), protein domains. Paste your sequences (FASTA format). Upload a file (FASTA format). The techni...

2

BAR+

https://bar.biocomp.unibo.it/bar2.0/stats.htm

BAR Bologna Annotation Resource. Protein clusters for sequence annotation. For further information and bug report please contact: BAR e-mail. For optimal rendering of the website please use: Mozilla Firefox Google Chrome Opera Apple Safari.

3

BAR+

https://bar.biocomp.unibo.it/bar2.0/help.htm

BAR Bologna Annotation Resource. Protein clusters for sequence annotation. How to use this tool. The server takes as input a protein sequence or a list of sequences. You can paste your sequence (or set of sequences up to a maximum of 50) selecting:. You need your Uniprot accession code/s). You may upload your file containing a maximum number of 50 sequences in FASTA format). You can resume your work by inserting the Job-ID. To receive a notification when BAR ends the processing of your query. All the que...

4

BAR+

https://bar.biocomp.unibo.it/bar2.0/genome.htm

BAR Bologna Annotation Resource. Protein clusters for sequence annotation. Protein sequences are collected from NCBI and EnsEMBL for a total of 988 complete proteome. There are 62 eukaryotes and 926 prokaryotes. In the organism list is also reported the corresponding identification code in BAR . Data were collected from:. NCBI Prokaryotes www.ncbi.nlm.nih.gov/genomes/lproks.cgi. NCBI Eukaryotes www.ncbi.nlm.nih.gov/genomes/leuks.cgi. EnsEMBL www.ensembl.org/info/data/ftp/index.html.

5

BAR+

https://bar.biocomp.unibo.it/bar2.0/tutorial.htm

BAR Bologna Annotation Resource. Protein clusters for sequence annotation. BAR web server functionalities are described in Help. When a sequence is not in BAR. When your sequence is not in BAR it is recognised as new by the system and a BLAST alignment over the BAR clusters and singletons starts. When the job is finished you may have the following results:. Your sequence falls into clusters with Sequence Identity ≥ 40% and Coverage ≥ 90%. No result is returned. Q9YZP2. When your sequence is already in BAR.

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lipid.biocomp.unibo.it

Biocomputing Group - University of Bologna

http://lipid.biocomp.unibo.it/predictors.html

Balanced subCellular Localization predictor. Detection and topology prediction of Prokaryotic outer-membrane betabarrel proteins. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Find Disulfide bonds in Eukaryotes with predicted subcellular Localization. Fault Tolerance Reconstruction of 3D Structure from Protein Contact Maps. Predict...

biocomp.unibo.it

Biocomputing Group - University of Bologna

http://biocomp.unibo.it/predictors.html

Balanced subCellular Localization predictor. Detection and topology prediction of Prokaryotic outer-membrane betabarrel proteins. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Find Disulfide bonds in Eukaryotes with predicted subcellular Localization. Fault Tolerance Reconstruction of 3D Structure from Protein Contact Maps. Predict...

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Bologna Annotation Resource 3.0

BAR 30 Bologna Annotation Resource. Protein functional and structural annotation. Accepted queries: Uniprot accession. Ligand code, NCBI taxonomy id. Data-validation-error-msg="Please specify only one FASTA sequence, complete with header, with a length in range 40-11000" class="form-control". Or upload a FASTA file. Sample sequence MTLSHSALQFWTHLYLWCLLLVPAVLTQQGSHTHAEDRLFKHLFGGYNRWARPVPNTSDV VIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNVTSLRVPSEMIWIP DIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQN...

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