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bioinfoblog.it – bioinformatics, human genetics, cancer, and nerdish stuff

bioinformatics, human genetics, cancer, and nerdish stuff

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bioinfoblog.it – bioinformatics, human genetics, cancer, and nerdish stuff | bioinfoblog.it Reviews
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bioinfoblog.it – bioinformatics, human genetics, cancer, and nerdish stuff | bioinfoblog.it Reviews

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bioinformatics, human genetics, cancer, and nerdish stuff

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1

enrichment – bioinfoblog.it

http://bioinfoblog.it/tag/enrichment

NCG enrichment implemented in DOSE. April 1, 2015. Giovanni Marco Dall'Olio. I would like to give a big thanks to Guangchuang Yu. The author of many cool R libraries like GoSemSim. For implementing a Network of Cancer Genes enrichment function in the DOSE R library. The new function is called enrichNCG, and can be found in the github version of DOSE. Library(devtools) code /code install github(c("GuangchuangYu/DOSE", "GuangchuangYu/clusterProfiler") library(DOSE) dev mode() mygenes = as.character(400...

2

tidy data – bioinfoblog.it

http://bioinfoblog.it/tag/tidy-data

A tutorial on organizing and plotting data with R. April 30, 2015. Giovanni Marco Dall'Olio. Every year I teach in the Programming for Evolutionary Biology course held in Leipzig. It’s an intensive three weeks course, in which we take 25 evolutionary biologists with no prior knowledge of programming, we lock them in a room together with some very good teaching assistants, and we keep explaining them how to program until they learn or manage to escape. Follow me on Twitter. Interviewed by LabWorm for NCG.

3

disease – bioinfoblog.it

http://bioinfoblog.it/tag/disease

NCG enrichment implemented in DOSE. April 1, 2015. Giovanni Marco Dall'Olio. I would like to give a big thanks to Guangchuang Yu. The author of many cool R libraries like GoSemSim. For implementing a Network of Cancer Genes enrichment function in the DOSE R library. The new function is called enrichNCG, and can be found in the github version of DOSE. Library(devtools) code /code install github(c("GuangchuangYu/DOSE", "GuangchuangYu/clusterProfiler") library(DOSE) dev mode() mygenes = as.character(400...

4

DOSE – bioinfoblog.it

http://bioinfoblog.it/tag/dose

NCG enrichment implemented in DOSE. April 1, 2015. Giovanni Marco Dall'Olio. I would like to give a big thanks to Guangchuang Yu. The author of many cool R libraries like GoSemSim. For implementing a Network of Cancer Genes enrichment function in the DOSE R library. The new function is called enrichNCG, and can be found in the github version of DOSE. Library(devtools) code /code install github(c("GuangchuangYu/DOSE", "GuangchuangYu/clusterProfiler") library(DOSE) dev mode() mygenes = as.character(400...

5

The Network of Cancer Genes database – bioinfoblog.it

http://bioinfoblog.it/2015/03/the-network-of-cancer-genes-database

The Network of Cancer Genes database. April 9, 2015. Giovanni Marco Dall'Olio. In the last year I have been part of the team maintaining and updating the Network of Cancer Genes. Database, also known as NCG. The Network of Cancer Genes database. The main focus of NCG. NCG is a small database and is not supported by any big consortium, but we do our best to fill our niche :-). The following list will describe you what you can get from NCG and how can it be useful to you. PTEN, a known tumor suppressor, ha...

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