openstructure.org
OpenStructure | Who is Using OpenStructure?
http://www.openstructure.org/users
Who is Using It? Who is Using OpenStructure? SWISS-MODEL - Expert System for Protein Structure Modelling. SWISS-MODEL is a widely used automated protein structure homology-modelling server for generating three-dimensional models of a protein. SWISS-MODEL automates the complex process of model building on an easy to use web based system, thereby making model information available also for non-specialists. SWISS-MODEL is available at http:/ swissmodel.expasy.org. The user can choose between the composite s...
beta.cameo3d.org
CAMEO Beta - Continuous Automated Model Evaluation - CAMEO-QE: Model Quality Estimation - Overall Performance
http://beta.cameo3d.org/quality-estimation
CAMEO Beta Continuous Automated Model EvaluatiOn. 3D - Protein Structure. QE - Model Quality Estimation. CP - Contact Prediction. LB - Ligand Binding. CAMEO-QE: Model Quality Estimation 1-month Performance. Precision vs Recall curve. As for the binary classification, the residues in the dataset are classfied as negative (i.e. good local quality) and positive (i.e. bad quality) applying an arbitrary lDDT local score threshold of 60. Please refer to the Help section. All models 4 weeks. 144858 (58.49 %).
beta.cameo3d.org
CAMEO Beta - Continuous Automated Model Evaluation - Help
http://beta.cameo3d.org/cameong_help
CAMEO Beta Continuous Automated Model EvaluatiOn. 3D - Protein Structure. QE - Model Quality Estimation. CP - Contact Prediction. LB - Ligand Binding. The help system is organized in several modules, one for each category supported in CAMEO. Should a term be used across categories it will be duplicated across all help pages for which the term applies. Please choose from the available help pages for the respective categories:. 3D - protein structure modeling. LB - ligand binding site residue prediction.
beta.cameo3d.org
CAMEO Beta - Continuous Automated Model Evaluation - FAQ
http://beta.cameo3d.org/cameong_faq
CAMEO Beta Continuous Automated Model EvaluatiOn. 3D - Protein Structure. QE - Model Quality Estimation. CP - Contact Prediction. LB - Ligand Binding. Does CAMEO build models for users? No CAMEO is not a meta-server and will not answer user requests. Its sole purpose is to continuously evaluate the accuracy of prediction servers based on known experimental structures released by the PDB. Which servers will be evaluated? Or contact us directly by email if your service does not fit within these categories.
beta.cameo3d.org
CAMEO Beta - Continuous Automated Model Evaluation - CAMEO-LB: Ligand Binding - Overall Performance
http://beta.cameo3d.org/lb/3-months
CAMEO Beta Continuous Automated Model EvaluatiOn. 3D - Protein Structure. QE - Model Quality Estimation. CP - Contact Prediction. LB - Ligand Binding. CAMEO-LB: Ligand Binding 3-months Performance. The data points shown in the figure illustrate the mean server response time, where larger points correspond to faster servers. The vertical bars correspond to the standard deviation of a server for the given time frame. Please refer to the Help section. For further details about the assessment procedure.
beta.cameo3d.org
CAMEO Beta - Continuous Automated Model Evaluation - CAMEO-CP: Contact Prediction - Overall Performance
http://beta.cameo3d.org/cp
CAMEO Beta Continuous Automated Model EvaluatiOn. 3D - Protein Structure. QE - Model Quality Estimation. CP - Contact Prediction. LB - Ligand Binding. CAMEO-CP: Contact Prediction 1-week Statistics. All targets 1 week. Total Number of Targets:. Total Number of Predictions:. Are those software which can be downloaded and run locally, Server. Are predictors that can be accessed trough a web interface.". Model quality estimation predictors (MQAPs) is intentionally left unspecified ('-').
