cmm.ki.si
Laboratory for Molecular ModelingHomepage of the Laboratory for Molecular Modeling at the National Institute of Chemistry in Ljubljana, Slovenia.
http://cmm.ki.si/
Homepage of the Laboratory for Molecular Modeling at the National Institute of Chemistry in Ljubljana, Slovenia.
http://cmm.ki.si/
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Laboratory for Molecular Modeling | cmm.ki.si Reviews
https://cmm.ki.si
Homepage of the Laboratory for Molecular Modeling at the National Institute of Chemistry in Ljubljana, Slovenia.
ProBiS Server
As of Jul 31, 2015. Your protein is compared with 42270. There are two ProBiS web pages out there: ProBiS at http:/ probis.cmm.ki.si. Maintained at the National Institute of Chemistry, Slovenia, and ProBiS-CHARMMing at https:/ probis.nih.gov. Situated at the National Institutes of Health, USA. Why is that? ProBiS-CHARMMing has additional functions only available from inside NIH: it enables energy minimization of predicted protein-ligand complexes and their interaction energy calculation. Konc,J. and ...
ENZO: Enzyme Kinetics
ENZO is a web tool for easy construction and quick testing of kinetic models of enzyme catalyzed reactions. The tool can be utilized by any interested researcher for efficient testing and evaluation of various kinetic models for a given enzyme catalyzed reaction. No installation or registration is required. It works on any operating system with a modern web browser. Test kinetic models in just 3 steps. Differential equations are automatically generated from the constructed scheme. Of Kinetic Models of En...
Center for Molecular Modeling
Center for Molecular Modeling. The Center for Molecular Modeling (CMM) is organized and functions according to the general scheme of knowledge centers. It was founded by the Ministry of Science and Technology of Slovenia. Transfer of knowledge, experiences, and results of molecular modeling to industries and other academic institutions. Development of high-performance computing facilities based on clusters of commodity computer components. Development of new methods used in molecular modeling.
STOCK: structure mapper and online coarse-graining kit
Ructure mapper and o. If you use this tool, please cite:. S Bevc, C. Junghans, M. Praprotnik (2015) STOCK: Structure mapper and online coarse-graining kit for molecular simulations. Journal of Computational Chemistry. 36, 467, doi: 10.1002/jcc.23806 ( Link.
Milan's home page
VRANA: A Parallel Computer. Performance of Parallel Computers. National Institutes of Health. Computational Chemistry List Home Page. Milan Hodoscek's research interests:. Development of methods for macromolecular simulations using mixed quantum mechanical and classical mechanics potential. The methods using GAMESS for the QM part are implemented in the standard CHARMM source tree from version c25 on. Parallelization of CHARMM code. Last modified: January 16, 2011.
cmm.ki.si
Summary for all the parallel machines
http://www.cmm.ki.si/parallel/summary.html
Timing in hours for MbCO 3830 water molecules (14026 atoms), 1000 steps, 12-14 A shift using standard parallel CHARMM and executed on variety of machines. Input files are available here. Nodes 1 2 4 8 16 32 64 128 256 512. 022 011 0.060 0.034 0.022 VRANA-4(K7/0.7GHz). 055 029 0.16 0.096 0.059 0.046 MD Grape-II. 0127(1board) 0.085(2boards) (no cutoff, host=5.02h) Dolly. 032 018 0.11 0.073 0.054 Athlon/1.33GHz. 027 014 (no cutoff=5.51; finite ewald=1.78) LoBoS-2. 112 058 0.31 0.17 HP/735.
MD simulacija argona
http://www.cmm.ki.si/md-argon
Z uporabo Verletovega algoritma. Število delcev (max 100). Število korakov (max 1500). Opis in izpis programa. Program simulira Lennard-Jones sistem z n. Delci v MD-celici prostornine V. Pri konstantni energiji. Za parametre se smatra, da so v reducirani obliki. Za napredovanje položajev in za izračun hitrosti program uporablja sumarno obliko Verletovega algoritma. 3D prikaz gibanja delcev. Izvorna koda PHP programa: algoritem.php.
Slike
http://www.cmm.ki.si/pictures
Struktura karboksi mioglobina, proteina, ki je odgovoren za prenos kisika po krvi. Kisik se veže na hemsko skupino prikazano z zeleno barvo. Struktura dvojne vijačnice, DNA (po slovensko DNK), ki tvori genetski materijal v celicah. Slika prikazuje umetno narejen sendvič sestavljen iz plasti lipidne membrane in molekul DNA. Tak sendvič ima to lepo lastnost, da je z njim zelo lahko spraviti DNA v celico.
VRANA project description
http://www.cmm.ki.si/vrana
VRANA = Vzporedni Računalnik za Akceleracijo Numeričnih Algoritmov. VRANA is the name of the bird. In the Slovenian language. CROW could be expanded as Columns and Rows Of Workstations. CROW = Columns and Rows Of Workstations. Ceter for Molecular Modeling (CMM). National Institute of Chemistry, Ljubljana, Slovenia. This is a project to build supercomputing facilities on a low budget. It is based on Beowulf. But later we switched to Gentoo GNU/Linux. However any other distribution could be run as well.
Matej Praprotnik - Homepage
http://www.cmm.ki.si/~praprot
Department of Molecular Modeling. National Institute of Chemistry. 386 1 476 0 370. 386 1 476 0 300.
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Cellular and Molecular Medicine Graduate Program –
Skip to primary navigation. Cellular and Molecular Medicine Program. Important links You Need to Know. Baltimore Sports & Social Club. Baltimore Events and Night Life. Charm City Circulator Bus. Peer Mentoring at JHU/SOM. Our training faculty have close ties with the top rated Johns Hopkins Hospital creating an ideal environment for translational research. CMM offers a rigorous curriculum of tailored courses, small group discussions, grant writing, career training and internship opportunities. Johns Hopk...
Cellular and Molecular Medicine Graduate Program –
Skip to primary navigation. Cellular and Molecular Medicine Program. Important links You Need to Know. Baltimore Sports & Social Club. Baltimore Events and Night Life. Charm City Circulator Bus. Peer Mentoring at JHU/SOM. Our training faculty have close ties with the top rated Johns Hopkins Hospital creating an ideal environment for translational research. CMM offers a rigorous curriculum of tailored courses, small group discussions, grant writing, career training and internship opportunities. Johns Hopk...
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Mike's Empty Homepage
My name is Michael Livshin. I'm moderately cute but not at all photogenic, so there are no pictures of me here. no pictures of my extermely cute and photogenic cat, either. I'm a programmer. I like staring at random text on the monitor, listening to random music in the headphones, and procrastinating in other unexciting ways. Since I'm too lame to maintain a proper homepage, I keep a sporadic blog. This page has no spatial relation to construction.). Last modified: Mon Mar 29 23:20:13 IDT 2008.
CMM
Astma & Allergi. Studera och arbeta i Sverige (eng text). Hjärt- and kärlsjukdomar och metabola sjukdomar. Neurogenetik och psykiatriska sjukdomar. Studera och arbeta i Sverige (eng text). Centrum för Molekylär Medicin vid Karolinska Institutet samlar mer än 400 personer med klinisk erfarenhet från Karolinska Universitetssjukhuset och med forskningskompetens från KI för att forska kring våra vanliga folksjukdomar. Donera till CMMs forskning. Lars Maegdefessel ny gruppledare vid CMM. Anna Wedell, professo...
Laboratory for Molecular Modeling
Laboratory for Molecular Modeling. The Center for Molecular Modeling (CMM) is organized and functions according to the general scheme of knowledge centers. It was founded by the Ministry of Science and Technology of Slovenia. Transfer of knowledge, experiences, and results of molecular modeling to industries and other academic institutions. Development of high-performance computing facilities based on clusters of commodity computer components. Development of new methods used in molecular modeling. Prof D...
Career and Marriage Ministry
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Kompetenzzentrum Materialfeuchte/Competence Center for Material Moisture (CMM) Startseite
Dr-Ing. Rainer Schuhmann. Willkommen am Kompetenzzentrum für Materialfeuchte. Das Kompetenzzentrum für Materialfeuchte (CMM) ist eine interfakultative Einrichtung des KIT und beschäftigt sich mit der Untersuchung von feuchteinduzierten und -gesteuerten Prozessen in mineralischen Systemen auf der Basis einer fundierten Materialcharakterisierung und der Weiterentwicklung von Feuchtemesstechnik. Gerade Partnerschaften mit der Industrie haben für uns eine große Bedeutung, da sie die Umsetzung von ...Wissensc...
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Microsoft Analysis Services 2000. Tutorials – cloud, languages, applications, business. Business and management Tutorials. Amazon AWS Cloud – AWS Certified Solutions Architect Associate (CSA) Tutorial. Learn all the Six Sigma Concepts explained in our Six Sigma tutorial plus many more in just 4 weeks. Buy our Six Sigma Handbook. Transition Management in BPO and outsourcing. Software and Computer Language Tutorials. Software Libraries and Frameworks. Software Packages and Tools.
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Upgrade to paid account! Sep 2nd, 2020 06:40 pm. Если автор ещё жив, то устал. Журнал ведётся спорадически. в смысле, обновляется урывками. Журнал ведётся человеком умеренной интересности. в смысле, нам только звёзд с неба не хватало. Человек относится к ЖЖ, главным образом, как к материалу для чтения. в смысле, добавляет тех, кого ему интересно читать. Удаление из френд-листа есть сигнал, что читать стало неинтересно либо нечего, и ничего другого не означает. Подзамочных записей нет или почти нет. Встре...
