crosslinkviewer.org
xiNET | HomexiNET is a visualisation tool for cross-linking and mass spectrometry data.
http://www.crosslinkviewer.org/
xiNET is a visualisation tool for cross-linking and mass spectrometry data.
http://www.crosslinkviewer.org/
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xiNET | Home | crosslinkviewer.org Reviews
https://crosslinkviewer.org
xiNET is a visualisation tool for cross-linking and mass spectrometry data.
crosslinkviewer.org
xiNET | Examples
http://crosslinkviewer.org/examples.php
Toggle the proteins between a bar and a circle. Click and drag on background. Click and drag on protein. Increases bar length until sequence is visible). Shift left-click on protein. Click and drag on handles that appear at end of bar. Hide/show protein (and all links to it). Hide links between two specific proteins. Right click on any link between those proteins. Show all hidden links. Right click on background.
xiNET | Home
http://crosslinkviewer.org/index.php
A tool for exploring and communicating cross linking / mass spectrometry data. Residue resolution positional information including linkage sites and linked peptides;. All types of cross-linking reaction product;. Additional sequence information such as domains. When using xiNET in your work.
xiNET | Home
http://crosslinkviewer.org/upload.php
Upload Your Own Data. You will be redirected to a unique URL for your data which you can share with others. You can view your results by uploading cross-link data. In a Comma Separated Values (CSV) file. Optionally, this can be accompanied by a FASTA file. Giving the protein sequences and/or a CSV file containing annotations. If the FASTA file is omitted then protein sequences are retrieved by looking up accession numbers via the Distributed Annotation System. Column Names in CSV files. XiNET can display...
xiNET | Menu
http://crosslinkviewer.org/menu.php
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XLink-DB 2.0 | Welcome to XLink-DB, a database and tools to store, visualize and predict protein interaction topologies.
http://xlinkdb.gs.washington.edu/xlinkdb
Welcome to XLinkDB 2.0! Database and tools to store, visualize and predict protein interaction topologies. New in XLinkDB 2.0:. Automated protein modeling and protein-protein docking (see About. Species-level interactomes on the Species View. New public datasets ( Citations. Graph theory viewers, and. Addition of a GUNK. Specific page available here. Now available for structure viewing and model editing, and. Available for quantitative cross-linking analysis! Display a Network in xiNET:. Page, and/or (2).
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xiNET | Home
A tool for exploring and communicating cross linking / mass spectrometry data. Residue resolution positional information including linkage sites and linked peptides;. All types of cross-linking reaction product;. Additional sequence information such as domains. Citation: Combe, C. W., Fischer, L. and Rappsilber, J. xiNET: Cross-link Network Maps With Residue Resolution. Mol Cell Proteomics.
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