gpcr2.biocomp.unibo.it

The Prediction Servers @ Bologna Biocomputing Unit

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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The Prediction Servers @ Bologna Biocomputing Unit | gpcr2.biocomp.unibo.it Reviews

<META> DESCRIPTION

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

<META> KEYWORDS

1 Bologna Biocomputing Group

2 prediction

3 server

4 web predictors

5 membrane protein

6 betabarrell HMM

7 transmembrane alpha-helixes

8 Bonding State

9 Residue Contacts

10 single point protein mutation

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biocomputing unit,department of biology,wwwbiocomp unibo it,application servers,predictors,bacello,cchmm,cchmmprof,cornet,dcon,hippie,protease inhibitor engine,i mutant,i mutant 2 0,i mutant suite,ispred,k fold,phd snp,predgpi,speplip,snps&go,data bases

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The Prediction Servers @ Bologna Biocomputing Unit | gpcr2.biocomp.unibo.it Reviews

https://gpcr2.biocomp.unibo.it

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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gpcr2.biocomp.unibo.it

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http://gpcr2.biocomp.unibo.it/biodec

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SPEPLip: Predictor of Signal Peptide and Lipoprotein Cleavage Sites in Proteins

http://gpcr2.biocomp.unibo.it/cgi/predictors/spep/pred_spepcgi.cgi

SPEPLip: Predictor of Signal Peptide and Lipoprotein Cleavage Sites in Proteins. Click here for the method accuracy. Click here for method details. Your e-mail address =. Sequence name [Optional] =. Paste your input sequence. To submit your prediction ( and please wait. Fariselli P, Finocchiaro G, Casadio R -SPEPlip: the detection of signal peptide and lipoprotein cleavage sites- Bioinformatics 19:2498-2499 (2003).

3

Hybrid Inhibitors-Proteases Proteases-Inhibitors Engine

http://gpcr2.biocomp.unibo.it/cgi/predictors/hippie/pred_hippie.cgi

Hybrid Inhibitors-Proteases Proteases-Inhibitors Engine! To submit your prediction ( and please wait. Bartoli L, Calabrese R, Fariselli P, Mita DG, Casadio R - A computational approach for detecting peptidases and their specific inhibitors at the genome level - BMC Bioinformatics 8:S3 (2007).

4

CORNET: Predictor of Residue Contacts in Proteins

http://gpcr2.biocomp.unibo.it/cgi/predictors/cornet/pred_cmapcgi.cgi

Prediction of Residue Contacts in Proteins. The method is a neural network based predictor that uses as input correlated mutations, sequence conservation, predicted secondary structure and evolutionary information. This is an extension of the two previous methods. Olmea O. and Valencia A. (1997) Fold. Des. 2: S25-32; Fariselli P and Casadio R. (1999) Prot. Engng 12:15-21). Your e-mail address =. Sequence name [Optional] =. Select your protein database:. Put your input sequence.

5

CCHMMPROF: Predictor of coiled-coil segments in proteins

http://gpcr2.biocomp.unibo.it/cgi/predictors/cchmmprof/pred_cchmmprof.cgi

CCHMMPROF: an hmm-based predictor of coiled-coil segments in proteins. Your e-mail address =. Sequence name [Optional] =. To submit your prediction ( and please wait. The sequence can be pasted in raw. Bartoli L., Fariselli P., Krogh A., Casadio R. CCHMM PROF: a HMM-based coiled-coil predictor with evolutionary information. Bioinformatics. 25:2757-2763. (2009).

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The Prediction Servers @ Bologna Biocomputing Unit

Welcome to the BIOCOMP.UNIBO prediction server. TRAMPLE: the transmembrane protein labelling environment. PONGO : a web server for multiple predictions of all-alpha transmembrane proteins. Balanced subCellular Localization predictor. Predictor of Coiled-Coils Regions in Proteins. Predictor of Coiled-Coils Regions in Proteins exploiting evolutionary information. Predictor of Residue Contacts in Proteins. Predictor of Disulfide Connectivity in Proteins. Predictor of Protein Interaction Sites. Database of p...

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