ismblab.genomics.sinica.edu.tw

::ISMBLab::Predict

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

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::ISMBLab::Predict | ismblab.genomics.sinica.edu.tw Reviews

<META> DESCRIPTION

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

<META> KEYWORDS

1 introduction

2 predict »

3 protein protein binding sites

4 protein carbohydrate binding sites

5 b cell epitope

6 protein nucleotide binding sites

7 protein metal binding sites

8 protein peptide binding sites

9 protein dna binding sites

10 protein rna binding sites

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introduction,predict »,protein protein binding sites,protein carbohydrate binding sites,b cell epitope,protein nucleotide binding sites,protein metal binding sites,protein peptide binding sites,protein dna binding sites,protein rna binding sites,design »

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::ISMBLab::Predict | ismblab.genomics.sinica.edu.tw Reviews

https://ismblab.genomics.sinica.edu.tw

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

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ismblab.genomics.sinica.edu.tw

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::ISMBLab::Members

http://ismblab.genomics.sinica.edu.tw/members.php

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. 128 Academia Road, Section 2, Nankang, Taipei, 115, Taiwan. Contact us: Hung-Pin Peng. With questions or comments.

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::ISMBLab::Predict

http://ismblab.genomics.sinica.edu.tw/predict.php

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

3

::ISMBLab::Predict

http://ismblab.genomics.sinica.edu.tw/index.php

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

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Gallery

http://ismblab.genomics.sinica.edu.tw/gallery

Atomisitc distributions of amino acids. PyMOL show file for describing how protein interior information is sampled. [ Download. Probability density maps of VEGF (probe 1 31). Probability density maps of UDA protein (probe 1 36). Water probability density map of antigen-antibody complexes. Visualization of density map construction step by step. Building density map of probe 4 (backbone O) on to Glu87 of chain V. [ PyMOL show file. Use PageUp/PageDown to move between steps).

5

::ISMBLab::Predict

http://ismblab.genomics.sinica.edu.tw/predict.php?pred=PPI

Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Checking Prediction Accuracy You need to give label in B-factor column. See tutorial for more information. Contact us: Hung-Pin Peng.

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vls3d.com

Vls3d - Binding pockets & ligand-pocket datasets

http://www.vls3d.com/links/bioinformatics/binding-pockets

Doctoral school for therapeutic Innovation. Computational Biology and Chemistry. Protein, DNA, RNA, Glycan modeling. Protein-protein docking, template-based docking. Hotspots, Interace residues, PPI modulators. PPI databases, network. Binding pockets and ligand-pocket datasets. Peptides, antibodies, epitopes. Visualization - commercial tools. Chemistry toolkits and utilities. Manage collections - chemical space. ADMET- physchem predictions - related tools. Off-targets, drug repurposing. Identifying Drugg...

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Multiple binding site predictions. Protein-Small molecule binding sites. Druggable PPI Hotspot sites. Published works are listed in reference page. Selected amount of submit jobs :. From RCSB Protein Data Bank. PDB ID Example: 3AUV. Chain(s)(comma separated) Example: H,L. Prediction Type : Select binding site predictors. Validation Code input 4 numbers. Private job. The link of result won't be appear in job list and will be only accessible through job id. Contact us: Hung-Pin Peng.

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