mdcune.psych.ucla.edu
Bioinformatics/Neuroinformatics — MDCUNE
https://mdcune.psych.ucla.edu/modules/bioinformatics
Only in current section. Lecture and Lab Materials. All Student Tests and Evaluations. Image library, student manual, and links to resources to quantify brain phenotype and perform a Quantitative Trait Locus analysis linking variation in the phenotype with chromosomal loci. Read the published article (from. CBE- Life Sciences Education. Summer 2010, 9:98-107. About using free online resources to teach bioinformatics and neuroinformatics. Article: Bioninformatics Teaching Tool. 3) Take the Student Pre-Test.
geschwindlab.neurology.ucla.edu
Links | The Geschwind Lab
http://geschwindlab.neurology.ucla.edu/links
Skip to main content. Human Developmental Expression Database. National Center for Biotechnology Information. Allen Mouse Brain Atlas - Allen Institute for Brain Science. 3D Surgical Atlas of Murine Head. The Whole Brain Atlas - Harvard Medical School. The GENSAT Project at the Rockerfeller University. Brain Map - Allen Institute for Brain Science. Translating Time Across Developing Mammilian Brains. The Visable Human Project - National Library of Medicine.
zebrafishbrain.org
Zebrafish Atlas - Tutorial Example
http://www.zebrafishbrain.org/links.php
The zebrafish information network. ZFIN anatomical resources page. Whole-embryo atlas displaying serial section collections and some microCT. A three dimensional OPT-based anatomical site. Zebrafish serial reconstructions and ontology browser. Impressive imaging of early development of the zebrafish using light sheet microscopy (not very relevant to neuroanatomy specifically but interesting. Online (Neuro) anatomical resources in other species. Collection of brain information on many strains of mice.
iniastress.org
INIAstress Analytic Tools and Resources | iniastress.org
http://www.iniastress.org/iniastressresources
Skip to main content. INIAstress Analytic Tools and Resources. Mice Available from the INIAstress Gene Targeted Mouse Core. The Mouse Brain Library. GeneNetwork - University of Tennessee Mirror of the UCSC Genome Browser.
quadxeon.uthsc.edu
Neurogenetics at UT Health Science Center
http://quadxeon.uthsc.edu/papers/shortcourse2002.html
Quantitative Neurogenetics and QTL Mapping. Control of Neuron Number and Stereology. Growth Cones and Dying Axons. Retina Development and Visual System Mutants. Note to the Reader. Society for Neuroscience. Neuroscience 2002. Presented as a symposium in Bioinformatics 2002 A Neuroscientist's Guide to Tools and Techniques for Mining and Refining Massive Data Sets. Organized by Robert W. Williams, PhD. and Dan Goldowitz, PhD. Everyday bioinformatics for neuroscientists: From maps to microarrays. In dealing...
quadxeon.uthsc.edu
Neurogenetics at UT Health Science Center
http://quadxeon.uthsc.edu/papers/GC_webQTL.html
Quantitative Neurogenetics and QTL Mapping. Control of Neuron Number and Stereology. Growth Cones and Dying Axons. Retina Development and Visual System Mutants. Note to the Reader:. Published winter 2003 in.  Volume 1, Issue 4, pps. 343-358 (ISSN 1539-2791). Genetic Correlates of Gene Expression in Recombinant Inbred Strains: A Relational Model System to Explore Neurobehavioral Phenotypes. Jintao Wang (Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY). Robert W. Williams.
epmba.org
..:: EPMBA - The Electronic Prenatal Mouse Brain Atlas ::..
http://www.epmba.org/publications
Gestational day 12, Coronal. Gestational day 16, Coronal. 3D EPMBA data set. Schambra, U. (2008). Prenatal Mouse Brain Atlas. Gestational Days 12, 14, 16, and 18; sagittal, coronal and horizontal sections. Springer. Paxinos, G., et al. (2007). Atlas of the Developing Mouse Brain. At E 17.5, P 0, and P 6. Academic Press, San Diego. Jacobowitz, D. M. and L. C. Abbot. (1998). Chemoarchitectonic Atlas of the Developing Mouse Brain. CRC Press, New York. Academic Press, San Diego. Academic Press, San Diego.
epmba.org
..:: EPMBA - The Electronic Prenatal Mouse Brain Atlas ::..
http://www.epmba.org/3d
Gestational day 12, Coronal. Gestational day 16, Coronal. 3D EPMBA data set. Instruction for Using 3D Data Set. Go to: Neuroterrain web site. Click on Available Technologies. Go to SamuraiMicrotome Neuroterrain Atlas browser. Click on Zip archive of SamuraiMicrotome. Open SamuraiMicrotome.zip and download file. Extract the file Samurai Microtome.jar (last version). Move file to desktop or application folder. Navigating 3D Data Set. Click on Samurai Microtome to open Virtual Knife. A Human Brain Project.
epmba.org
..:: EPMBA - The Electronic Prenatal Mouse Brain Atlas ::..
http://www.epmba.org/gd16coronal/index.php
Gestational day 12, Coronal. Gestational day 16, Coronal. 3D EPMBA data set. Atlas of Developing Mouse Brain Gestational (Embryonic) Day 16. Currently on section: 145. View [ hi-res w/scale bar represent 1mm. Dopaminergic nucleus Substantia nigra (sn). Dopaminergic area - ventral tegmental area (VTA). Anterior commissure, anterior part. Anterior commissure, posterior part. Anterior dorsal hypothalamic nucleus. Anterior olfactory nucleus, dorsal part. Anterior olfactory nucleus, medial part. Fasciculus re...
epmba.org
..:: EPMBA - The Electronic Prenatal Mouse Brain Atlas ::..
http://www.epmba.org/index.html
Gestational day 12, Coronal. Gestational day 16, Coronal. 3D EPMBA data set. ELECTRONIC PRENATAL MOUSE BRAIN ATLAS. Find out more about EPMBA? Learn how we did it. Find Learning Material by topic:. Atlas of Developing Mouse Brain Gestational (Embryonic) Day 12: Schambra, Annotations Complete. The 3D EPMBA data set has been mounted on a NeuroTerrain Atlas Server (NtAS). Atlas of Developing Mouse Brain Embryonic Day 16: Schambra, Annotations Complete. A Human Brain Project. Funded jointly by the NIMH.