ontology.iedb.org

IEDB Source of Truth

IEDB Source of Truth. SoT is a system for dynamically creating, maintaining, and sharing an application ontology that builds on multiple reference resources. A reference resource could be a reference ontology such as OBI, or a similar non-ontological resource such as UniProt. We intend for the SoT system to be general, but the primary goal is to serve projects at LJI, including IEDB, LabKey database for HIPC and DORAS, TopCat, and Bioinformatics Core.

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IEDB Source of Truth. SoT is a system for dynamically creating, maintaining, and sharing an application ontology that builds on multiple reference resources. A reference resource could be a reference ontology such as OBI, or a similar non-ontological resource such as UniProt. We intend for the SoT system to be general, but the primary goal is to serve projects at LJI, including IEDB, LabKey database for HIPC and DORAS, TopCat, and Bioinformatics Core.

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IEDB Source of Truth | ontology.iedb.org Reviews

https://ontology.iedb.org

IEDB Source of Truth. SoT is a system for dynamically creating, maintaining, and sharing an application ontology that builds on multiple reference resources. A reference resource could be a reference ontology such as OBI, or a similar non-ontological resource such as UniProt. We intend for the SoT system to be general, but the primary goal is to serve projects at LJI, including IEDB, LabKey database for HIPC and DORAS, TopCat, and Bioinformatics Core.

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ontology.iedb.org

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ONTIE - ONTology of Immune Epitopes

https://ontology.iedb.org/iedb.htm

ONTIE - Ontology of Immune Epitopes. We are in the process of developing tools for exporting IEDB. Data into semantic web formats using ONTIE and related ontologies. We are exporting our data into RDF format. And the RDF Primer. RDF statements or "triples" consist of a subject, a predicate, and an object, and these are usually provided in the form of IRIs. Like links on the World Wide Web. Collections of statements form a graph. The Terse RDF Triple Language (see Wikipedia. And the OWL 2 Primer. Our appr...

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ONTIE - ONTology of Immune Epitopes

https://ontology.iedb.org/index.htm

ONTIE - Ontology of Immune Epitopes. The Ontology of Immune Epitopes (ONTIE) is an effort to represent terms in the immunology domain in a formal ontology with the specific goal of representing experiments that identify and characterize immune epitopes. It has been developed in conjunction with the Ontology for Biomedical Investigations (OBI). And The Immune Epitope Database and Analysis Resource (IEDB). Formal ontologies are carefully constructed systems of terminology that are designed to help humans a...

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ONTIE - ONTology of Immune Epitopes

https://ontology.iedb.org/downloads.htm

ONTIE - Ontology of Immune Epitopes. Here we provide several options for downloading the ONTIE ontology and the IEDB export. Please note that these are best viewed with the Protégé OWL editor (version 3.4.1 or version 4.0). To view the full export, it is recommended to allocate at least 500MB of RAM to Protégé. This file contains the classes and relations used in the IEDB export. First, load ONTIE.owl into Protege. Import the IEDB export.owl file as follows:. In Protege 3.4.1:. In Protege 4.0:. Make sure...

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IEDB Source of Truth

IEDB Source of Truth. SoT is a system for dynamically creating, maintaining, and sharing an application ontology that builds on multiple reference resources. A reference resource could be a reference ontology such as OBI, or a similar non-ontological resource such as UniProt. We intend for the SoT system to be general, but the primary goal is to serve projects at LJI, including IEDB, LabKey database for HIPC and DORAS, TopCat, and Bioinformatics Core.

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