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An Open Science Grid Work Log | Things seen on the OSG trail.Things seen on the OSG trail.
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An Open Science Grid Work Log | Things seen on the OSG trail. | osglog.wordpress.com Reviews
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Things seen on the OSG trail.
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SAGA Hadoop | An Open Science Grid Work Log
https://osglog.wordpress.com/2012/02/17/saga-hadoop
An Open Science Grid Work Log. Things seen on the OSG trail. NAMD with PBS and Infiniband on NERSC Dirac. Duke Physics MPI at RENCI Blueridge with Grayson and Pegasus 4.0 →. February 17, 2012. Has become a fixture where big data is concerned but it has been difficult to use in HPC and HTC cluster environments. This is becoming unfortunate as an increasing number of new algorithms assume Hadoop’s an option. I tried SAGA-Hadoop first but it should be noted that, myHadoop. To make this plausible for the OSG:.
Virtualizing Engage Central | An Open Science Grid Work Log
https://osglog.wordpress.com/2010/10/25/osg-cyberinfrastructure-vm-migration
An Open Science Grid Work Log. Things seen on the OSG trail. High Throughput Parallel Molecular Dynamics on OSG →. October 25, 2010. Well, this is just not going to be an interesting post to most of you. That’s just the way it is sometimes. We need to move engage-central off of the old physical hardware it’s on to a new virtual machine. The old machine will remain online until we’re comfortable everything on the new one is working properly. Create the virtual machine. Operating System: CentOS 5.5. Chown ...
An Open Science Grid Work Log | Things seen on the OSG trail. | Page 2
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An Open Science Grid Work Log. Things seen on the OSG trail. Newer posts →. Protected: Grayson – Science Workflow on the Hybrid Grid. August 10, 2011. This content is password protected. To view it please enter your password below:. High Throughput Computing (HTC). High Throughput Parallel Computing (HTPC). Whole Genome Sequencing and Pegasus. June 7, 2011. As a first step, they joined the OSG Engage. VO This provides them access to the new Engage Submit node. Getting used to searching the Pegasus logs f...
Grid Jobs with OSG Matchmaker | An Open Science Grid Work Log
https://osglog.wordpress.com/2010/09/07/grid-jobs-with-osg-matchmaker
An Open Science Grid Work Log. Things seen on the OSG trail. IRODS in the Duke, NERSC, RENCI Collaboration →. Grid Jobs with OSG Matchmaker. September 7, 2010. Thanks to Mats for the very helpful advanced grid job example. Provided in the OSG Matchmaker. It Isn’t Easy Being a Grid Job. A central challenge of running complex grid applications is managing the schedule, failures and diverse outcomes affecting individual compute jobs. Specify the order of execution of parts of the job. Define policies for co...
Engage Submit Host | An Open Science Grid Work Log
https://osglog.wordpress.com/engage-submit-host-overview
An Open Science Grid Work Log. Things seen on the OSG trail. OSG Engage VO Submit Host. RENCI’s new Engage VO submit host. The new submit host uses Condor. For job scheduling. Condor provides the DAGMAN workflow manager which defines precedence relationships and retry semantics for jobs within a larger workflow. Condor is a basic component used by GlideinWMS and Pegasus WMS. The original Engage submit node used OSG Match Maker. To target and manage Condor-G jobs. The new submit node uses GlideinWMS&#...
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continuousintegration.wordpress.com
Architecture and Configuration | Continuous Integration
https://continuousintegration.wordpress.com/2010/11/30/architecture
CI for scientific software at RENCI. November 30, 2010. Let’s just start with a picture. CI Server environment architecture. At a high level, installing involves downloading and unpacking the archive, sourcing the environment script and configuring the applications. Tar xvzf ci-server-0.1-SNAPSHOT.tar.gz. Install build tools. At RENCI, these include:. Java JDK 1.6.0 21. Apache Maven 2.2.1. Fortran 11.1 – and any other compilers needed. Source the environment file. Configure an SSL certificate for mod ssl.
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Continuous Integration | Continuous Integration
https://continuousintegration.wordpress.com/2010/11/22/5
CI for scientific software at RENCI. Designing the Stack →. November 22, 2010. Is the build automation tool used to periodically build a wide assortment of software components. It’s a mature, stable application with a large user base and extensive feature set. Automated builds notify teams of failures quickly to help keep systems healthy. This entry was posted in Uncategorized. Designing the Stack →. Leave a Reply Cancel reply. Enter your comment here. Address never made public). Enter your email address...
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stevencox | Continuous Integration
https://continuousintegration.wordpress.com/author/stevencox
CI for scientific software at RENCI. November 30, 2010. Introduction Let’s just start with a picture. Figure 1. CI Server environment architecture. The CI Server The three systems – Hudson, Nexus and Opengrok are installed in a single Tomcat instance. The Tomcat instance, bundled with all three applications is … Continue reading →. November 30, 2010. November 22, 2010. Enter your email address to subscribe to this blog and receive notifications of new posts by email. Join 3 other followers.
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November | 2010 | Continuous Integration
https://continuousintegration.wordpress.com/2010/11
CI for scientific software at RENCI. Monthly Archives: November 2010. November 30, 2010. Introduction Let’s just start with a picture. Figure 1. CI Server environment architecture. The CI Server The three systems – Hudson, Nexus and Opengrok are installed in a single Tomcat instance. The Tomcat instance, bundled with all three applications is … Continue reading →. November 30, 2010. November 22, 2010. Enter your email address to subscribe to this blog and receive notifications of new posts by email.
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An Open Science Grid Work Log | Things seen on the OSG trail.
An Open Science Grid Work Log. Things seen on the OSG trail. On the Open Science Grid Trail. The open science grid is a distributed heterogeneous network of computing clusters. Its infrastructure and protocols allow members to submit high throughput compute jobs for remote execution. All use is authenticated and authorized via a PKI infrastructure which associates jobs to a user and the virtual organization (VO) they belong to. Installing OSG components like Compute Elements. Is a critical challenge....
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