wiki.thebiogrid.org
BioGRID Architecture and Data Model | BioGRID
http://wiki.thebiogrid.org/doku.php/architecture
BioGRID Architecture and Data Model. Help and Support Resources. BioGRID Architecture and Data Model. BioGRID Architecture and Data Model. The BioGRID database architecture consists of three distinct components: (i) the Core. Iii) the Interaction Management System (IMS). All of the BioGRID databases use MySQL 5.1. We chose MySQL as the database because it is freely available, platform independant, and easy to install and maintain without sacrificing performance or features.
yeastkinome.org
SCH9 (YHR205W) | YeastKinome.org
https://yeastkinome.org/yeast-kinase/SCH9.html
Saccharomyces cerevisiae Kinase and Phosphatase Interactome (KPI) Resource. Aliases: YHR205W, SCH9, KOM1. Protein kinase involved in transcriptional activation of osmostress-responsive genes; regulates G1 progression, cAPK activity, nitrogen activation of the FGM pathway; involved in life span regulation; homologous to mammalian Akt/PKB. On Cytoscape figures, arrows represent only bait-prey directionality, not functional directionality.
thebiogrid.org
STE20 (YHL007C) Result Summary | BioGRID
http://thebiogrid.org/36419/protein/saccharomyces-cerevisiae/ste20.html
Gene / Identifier Search. Human Immunodeficiency Virus 1. Emericella nidulans (FGSC A4). Human Immunodeficiency Virus 1. Human Immunodeficiency Virus 2. Streptococcus pneumoniae (Hungary 19A-6). Mitogen-activated protein kinase kinase kinase kinase STE20, L000002123, YHL007C. Cdc42p-activated signal transducing kinase; involved in pheromone response, pseudohyphal/invasive growth, vacuole inheritance, down-regulation of sterol uptake; GBB motif binds Ste4p; member of the PAK (p21-activated kinase) family.
wiki.thebiogrid.org
Supported Identifiers for Searches | BioGRID
http://wiki.thebiogrid.org/doku.php/identifiers
Supported Identifiers for Searches. Help and Support Resources. Supported Identifiers for Searches. Supported Identifiers for Searches. These are listed as follows in the BIOGRID-IDENTIFIERS-* files available at on our Downloads. Last modified: 2015/04/26 19:34 by. Osprey Network Visualization System.
wiki.thebiogrid.org
BioGRID Search Results Layout | BioGRID
http://wiki.thebiogrid.org/doku.php/results
BioGRID Search Results Layout. Help and Support Resources. BioGRID Search Results Layout. BioGRID Search Results Layout. The following is an example layout viewed when searching for your protein of interest within the BioGRID. We've outlined all areas of interest with yellow letters, and defined what each area represents in the definitions at the bottom of the page. Standard annotation data for search results including official name, synonyms, organism name, and description. By clicking here, you can act...
wiki.thebiogrid.org
Help and Support Resources | BioGRID
http://wiki.thebiogrid.org/doku.php/start
Help and Support Resources. Help and Support Resources. Help and Support Resources. Search Results and Layout. Curation Methodologies and Guides. Contributing to the BioGRID. Help and Support Resources. And we will answer your question directly. Our site is constantly changing so please check back often for possible changes. Search Results and Layout. Search results layout - A complete breakdown of our results pages. Supported identifiers for searches. Search tips - How to better find what you want.
wiki.thebiogrid.org
BioGRID Network Viewer | BioGRID
http://wiki.thebiogrid.org/doku.php/network_viewer:start
Help and Support Resources. The BioGRID Network viewer is a graphical tool for visualising complex networks. You can access it from any of our result pages by simply choosing the network view. The following Network Viewer specific resources are also available. The BioGRID Network Viewer uses the following tools and technologies. Cytoscape.js Pan/Zoom Widget. Cytoscape.js Context Menu. Last modified: 2015/04/26 18:07 (external edit). Osprey Network Visualization System.
wiki.thebiogrid.org
BioGRID Curation Guide | BioGRID
http://wiki.thebiogrid.org/doku.php/curation_guide
Help and Support Resources. Curation Questions and Answers. BioGRID Team Members, References, and Funding Details. The following sections contains detailed information on BioGRID curation guidelines. Direction of Interactions (Bait/Hit). HTP and LTP Interaction Tags. Curation Questions and Answers. Should we curate all interactions in a paper? Why is it only possible to add protein-RNA interactions and not DNA-protein interactions? How should protein-RNA interactions be curated? The U4, U5 and U6 snRNAs ...
wiki.thebiogrid.org
BioGRID Plugin 2.0 | BioGRID
http://wiki.thebiogrid.org/doku.php/biogridplugin2
BioGRID Plugin 2.0. Help and Support Resources. BioGRID Plugin 2.0. BioGRID Plugin 2.0. Changes in BiogridPlugin 2.1. Changes in BiogridPlugin 2.2. BioGRID Plugin 2.0. BiogridPlugin2 is a plugin for the Cytoscape network visualization tool ( http:/ www.cytoscape.org. The A-B directionality of the interaction in the BioGRID tab file compared to the directionality of the interaction in Cytoscape (i.e. source node target node). ‘forward’ (same directionality), ‘reverse’ (opposite directionalitie...This colu...
wiki.thebiogrid.org
Online Tools and Resources | BioGRID
http://wiki.thebiogrid.org/doku.php/tools
Online Tools and Resources. Help and Support Resources. Online Tools and Resources. Online Tools and Resources. Online Tools and Resources. Listed on this page are tools, software, and resources either written by the BioGRID team or a third party that can help you make use of BioGRID interaction data. All tools and resources are released WITHOUT ANY WARRANTY. Saccharomyces cerevisiae Kinase and Phosphatase Interactome (KPI) Resource. Osprey: Network Visualization System. Cytoscape is an open source bioin...
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