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Yoshinori Tamada, Ph.D. WWW Site

Home : : Publications. Welcome to my www site. I am Dr. Yoshinori Tamada. An assistant professor at Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. I have moved from Laboratory of DNA Information Analysis. Of Human Genome Center. Institute of Medical Science. The University of Tokyo. Since April 1, 2011. ). Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. December 2005 - June 2006.

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Yoshinori Tamada, Ph.D. WWW Site | ytlab.jp Reviews

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Home : : Publications. Welcome to my www site. I am Dr. Yoshinori Tamada. An assistant professor at Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. I have moved from Laboratory of DNA Information Analysis. Of Human Genome Center. Institute of Medical Science. The University of Tokyo. Since April 1, 2011. ). Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. December 2005 - June 2006.

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Yoshinori Tamada, Ph.D. WWW Site | ytlab.jp Reviews

https://ytlab.jp

Home : : Publications. Welcome to my www site. I am Dr. Yoshinori Tamada. An assistant professor at Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. I have moved from Laboratory of DNA Information Analysis. Of Human Genome Center. Institute of Medical Science. The University of Tokyo. Since April 1, 2011. ). Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. December 2005 - June 2006.

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ytlab.jp

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Software :: Yoshinori Tamada, Ph.D.

http://www.ytlab.jp/software.html

Software : : Web Supplement. This page lists the software developed by me. Is open source gene network estimation software able to run in parallel. On PCs and massively parallel supercomputers. The software estimates a state space model.

2

Web Supplement :: Yoshinori Tamada, Ph.D.

http://www.ytlab.jp/supplement.html

Online web supplement for my publications. Tamada et al. (2011) IEEE/ACM Transactions on Computational Biology and Bioinformatics. Imoto, S., Araki, H., Nagasaki, M., Print, C., Charnock-Jones, D.S., and Miyano, S. Estimating genome-wide gene networks using nonparametric Bayesian network models on massively parallel computers. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 3), 683-697, 2011. Tamada et al. (2009) Pacific Symposium on Biocomputing (PSB2009). 6), 1295-1313, 2005. We are ...

3

Publications :: Yoshinori Tamada, Ph.D.

http://www.ytlab.jp/publications.html

Publications : : Software. Suda, R., Efficient Parallel Algorithm for Optimal DAG Structure Search on Parallel Computer with Torus Network. In Proceedings of the 16th International Conference on Algorithms and Architectures for Parallel Processing. ICA3PP 2016), accepted. (* These authors contributed equally to this work.) ( Conference web site. Okazawa, H., Mao, Y., Tamura, T., Yuki, Y., Abe, D., Tamada, Y. Cell Death and Diseases. E2207, 2016. ( Full Text. 4), 17652-17664, 2016. ( Full Text. Dunmore, B...

4

玉田嘉紀 WWW Site

http://www.ytlab.jp/ja/index.html

Home : : Publications. DNA チップ等による遺伝子発現データ，タンパク間相互作用情報や DNA 配列情報などの生物学的なデータから，数学的統計学的情報科学的な方法によりスーパーコンピュータスパコンを用いて，細胞内の遺伝子制御のネットワークである遺伝子ネットワーク (Gene Network) を解き明かす研究をしています. DNA シークエンスマッピングデータ解析パイプライン. 108-8639 東京都港区白金台 4-6-1 東京大学医科学研究所ヒトゲノム解析センター DNA 情報解析分野. 玉田嘉紀たまだよしのり. 京都大学博士情報学 2005 年 11 月 24 日. 統計科学技術センター助手翌年 4 月より助教. GNI Systems Pharmacology Research Institute Senior Researcher. 2006 年 12 月 2007 年 12 月英国ケンブリッジ大学 Visiting Researcher. 大学院理学研究科数学専攻修士課程博士前期課程修了. 学位京都大学博士情報学取得.

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SiGN: 大規模遺伝子ネットワークソフトウェア

http://sign.hgc.jp/index_ja.html

サインは DNA チップなどで得られる遺伝子発現データやタンパク発現データ， miRNA を含む noncoding RNA 発現データなどから細胞内分子の発現制御システムのモデル化予測を行うスーパーコンピュータ用ソフトウェア群です SiGN は時系列発現データからシステムをモデル化する状態空間モデルを用いた SiGN-SSM，時系列データおよびノックダウンや患者サンプルなどの静的データから遺伝子間の発現の依存関係をベイジアンネットワークを用いて予測する SiGN-BN，静的データから遺伝子間の発現の依存関係をL1正則化法を用いて予測する SiGN-L1 の 3 つの数学的統計学的モデルを用いて大規模遺伝子ネットワークを予測推定することができます SiGN は非常に複雑で大量の計算を行うため，実行にはスーパーコンピュータが必須ですこのソフトウェアは 2012 年に完成が予定されている次世代スーパーコンピュータ京けいを利活用するために理化学研究所の次世代計算科学研究開発プログラムが進めている次世代生命体統合シミュレーションの研究開発プロジェクトで研究開発されているソフトウェアの１つ...

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Members [SiGN: Large-Scale Gene Network Estimation Software]

http://sign.hgc.jp/members.html

SiGN: Large-Scale Gene Network Estimation Software. Lecturer ( Web Site. Associate Professor ( Web Site. Professor ( Web Site. Laboratory of DNA Information Analysis and. Laboratory of DNA Sequence Analysis. Institute of Medical Science. The University of Tokyo. Department of Integrative Genomics, Laboratory of Biomedical Information Analysis,. Tohoku Medical Megabank organization, Tohoku University. Data Analysis Fusion Team. RIKEN Computational Science Research Program. Institute of Medical Science.

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Bulalo Soup for the Pinoy Soul

Bulalo Soup for the Pinoy Soul. Cholesterol-filled stories to kill the old self, and, hopefully, give birth to a better one. Wednesday, April 1, 2015. And his sweat was like drops of blood falling to the ground." - Lk 22:44. Ang isa sa mga hindi ko maintindihang pangyayari sa Bibliya ay ang paghihinagpis ni Hesus habang nagdarasal S'ya sa Getsemane. Sa sobrang lungkot, ang Kanyang pawis ay pumatak na parang dugo. O 'yung babaeng may labindalawang taon nang dinurugo (Mk 5:25). Ni Hesus, although. At pangh...

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機能製品・高速演算に必要なCUDAやjavaの開発 | 株式会社ワイティーエル

会社名株式会社ワイティーエル YTL INC. 経営陣代表取締役近藤良夫. 住所横浜市中区太田町1-18 JOYビル3階. は NVIDIA が提供する並列コンピューティングアーキテクチャで、GPU (Graphics Processing Unit) の能力を利用することにより、計算処理能力を劇的に向上することができ、自動運転などハイテク化が進む電気自動車のテスラや画像や動画の処理、計算生物学や計算科学、流体力学シミュレーション、CT画像再構成、地震解析などを含む、CUDAは幅広いところで使われはじめており、引き合いが急速に増えているプログラムです。センサーを用いて設備医療機器の開発研究製造販売で事業を展開しています。

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Photolab Yves Thomas: Home

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ytlab.jp

Yoshinori Tamada, Ph.D. WWW Site

Home : : Publications. Welcome to my www site. I am Dr. Yoshinori Tamada. An assistant professor at Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. I have moved from Laboratory of DNA Information Analysis. Of Human Genome Center. Institute of Medical Science. The University of Tokyo. Since April 1, 2011. ). Department of Computer Science. Graduate School of Information Science and Technology. The University of Tokyo. December 2005 - June 2006.

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YTLab -- YTLab Presents

Computer Aided Biological Design. YtLectures: Ying-Ting Lin's Lectures. MOOCs: Massive Open Online Courses. Encyclopedia: to know everything. Ph D, Associate Professor,. College of Life Sciences.

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